The runtime role (lovebug) doesn't have CREATE on the petalbrain database
even though it owns the second_brain schema, so a bare
`CREATE SCHEMA IF NOT EXISTS` errors out with permission denied. Gate
the bootstrap on a pg_namespace lookup so we only attempt the create
when the schema is genuinely missing — operators bootstrap it once as
postgres superuser, alembic just respects it afterward.
The smoke test exercises the full Postgres + embedding path against a
live DB + Ollama (autoskipped otherwise): writes an extraction, embeds
the summary, asserts public.embeddings has the expected row count, and
re-embeds to verify the delete-before-insert idempotency.
Run extraction under the Max OAuth subscription via `claude -p` instead
of the per-token Anthropic API. The new src/second_brain/llm/claude_cli.py
spawns the CLI in a hermetic tempdir so the host project's CLAUDE.md,
hooks, MCP config, and settings don't leak into the prompt. Uses
--json-schema with LLMExtraction.model_json_schema() so the CLI guarantees
valid structured output — replaces the brittle markdown-fence stripping
in the old engine. The Anthropic SDK is preserved as an optional "api"
backend selectable via config.
While in here, fix a handful of blockers that the smoke test surfaced:
- scheduler filtered ANALYZED instead of TRANSCRIBED, so it never
actually advanced any sources
- process command read sources in a closed session, raising
DetachedInstanceError before any work happened
- config.prompts_dir walked one parent too many, resolving outside
the project and forcing the fallback prompt for every domain
- compiler called git rev-parse against a vault that was never
git-init'd; now auto-inits with an empty seed commit and skips empty
commits cleanly
- datetime.utcnow() deprecated in 3.12+ — single utcnow() helper in
models.py keeps naive UTC semantics so no DB migration is needed
- sess.query(...).get() deprecated in SA 2.x → sess.get(...)
- dead `import anthropic` removed from compiler
Smoke test (article → process → accept → compile) succeeds end-to-end
with ANTHROPIC_API_KEY unset. a-review run saved under reviews/.
Co-Authored-By: Claude Opus 4 <noreply@anthropic.com>
